First problem was that my bluetooth mouse wasn't working.
I had to enable bluetooth in settings and remove & pair mouse again.

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Good news is, that all shell extensions I use are working. Some do not declare version 42 support yet: for now I edited metadata.json locally, later I will try to open pull requests.

New has separate settings for light and dark desktop backgrounds. I use custom day/night dynamic wallpaper and there is no way of setting it in GUI for dark variant.
I had to manually set the GSettings key "org.gnome.desktop.background.picture-uri-dark"

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